MLOC_4782 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains188.679138.764133.618157.431
LEAShoots from the seedlings (10 cm shoot stage)54.158423.796929.452332.1689
INF1Young developing inflorescences (5mm)419.515382.044369.187348.571
INF2Developing inflorescences (1-1.5 cm)198.029238.744235.412257.486
ROORoots from the seedlings (10 cm shoot stage)135.092176.487190.423222.434
NODDeveloping tillers at six leaf stage, 3rd internode1.679541.876246.568529.06479
CAR5Developing grain, bracts removed (5 DPA)114.193110.381114.231117.495
CAR15Developing grain, bracts removed (15 DPA)15.151110.304814.470131.4916



CDS Structure of MLOC_4782






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_4782.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_4782.1CUST_12500_PI427708080AvailableAvailablecontig_135494 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g08360.1 +2 2e-166 471 234/243 (96%) 13105.m00919 protein rRNA 2-O-methyltransferase fibrillarin 2, putative, expressed
TAIR PP10 AT5G52470.1 +2 3e-152 434 213/243 (88%) | Symbols: FIB1, FBR1, ATFIB1, ATFBR1, SKIP7 | fibrillarin 1 | chr5:21294290-21296509 FORWARD LENGTH=308