MLOC_47611 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.9741560.84478401.51152
LEAShoots from the seedlings (10 cm shoot stage)3.965579.4712811.843813.1758
INF1Young developing inflorescences (5mm)1.988910.7084211.669512.05894
INF2Developing inflorescences (1-1.5 cm)1.190510.5551591.599241.75512
ROORoots from the seedlings (10 cm shoot stage)3.369430.920184.868142.59141
NODDeveloping tillers at six leaf stage, 3rd internode00.9704222.797136.33743
CAR5Developing grain, bracts removed (5 DPA)1.660420.74222601.54089
CAR15Developing grain, bracts removed (15 DPA)0000.567058



CDS Structure of MLOC_47611






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_47611.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_47611.1CUST_6717_PI427708083AvailableAvailablecontig_308985 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g39390.1 -1 2e-19 81 37/47 (79%) 13109.m03946 protein oxidoreductase, aldo/keto reductase family protein, putative, expressed
TAIR PP10 AT2G27680.1 -1 2e-16 72 33/47 (70%) NAD(P)-linked oxidoreductase superfamily protein | chr2:11803981-11805965 REVERSE LENGTH=384