- Predicted Gene MLOC_47606
MLOC_47606 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_47606_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_47606_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0.17858 | 0 | 0.153558 |
INF1 | Young developing inflorescences (5mm) | 0.175031 | 0 | 0 | 0.166161 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0.0462155 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.105933 | 0 | 0.552218 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 432.513 | 498.756 | 421.859 | 469.933 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.69234 | 1.43702 | 2.11522 | 4.20565 |
CDS Structure of MLOC_47606
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_47606.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g15710.1 |
+3 |
1e-48 |
158 |
79/127 (62%) |
13102.m01752 protein plastocyanin-like domain containing protein, putative |
TAIR PP10 |
AT2G02850.1 |
+3 |
2e-31 |
113 |
57/129 (44%) |
| Symbols: ARPN | plantacyanin | chr2:826630-827720 REVERSE LENGTH=129 |