MLOC_47597 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.197872.511033.928080
LEAShoots from the seedlings (10 cm shoot stage)0.332972000
INF1Young developing inflorescences (5mm)0.3573120.5390181.812070
INF2Developing inflorescences (1-1.5 cm)1.858411.302030.5687980
ROORoots from the seedlings (10 cm shoot stage)1.025042.471541.247140
NODDeveloping tillers at six leaf stage, 3rd internode1.306650.39556600
CAR5Developing grain, bracts removed (5 DPA)00.1593750.1975560
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_47597






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK355877
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355877NoneNoneNoneNone
MLOC_30290.1NoneAvailableNonecontig_208153 (Mapped)
MLOC_41886.1NoneAvailableAvailablecontig_261145 (Not mapped)
MLOC_46902.1NoneAvailableNonecontig_297432 (Mapped)
MLOC_47597.1NoneAvailableNonecontig_308729 (Not mapped)
MLOC_52123.1NoneAvailableNonecontig_372973 (Mapped)
MLOC_69488.1NoneAvailableNonecontig_56495 (Mapped)
MLOC_81611.1NoneAvailableNonecontig_97233 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----