MLOC_47583 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.730213.97945.063972.87041
LEAShoots from the seedlings (10 cm shoot stage)3.934723.094091.74321.79535
INF1Young developing inflorescences (5mm)4.766376.740358.22383.27826
INF2Developing inflorescences (1-1.5 cm)6.456018.235496.392485.44764
ROORoots from the seedlings (10 cm shoot stage)2.346813.180866.115942.36814
NODDeveloping tillers at six leaf stage, 3rd internode5.368798.786025.492218.4844
CAR5Developing grain, bracts removed (5 DPA)8.220797.416026.560974.75975
CAR15Developing grain, bracts removed (15 DPA)5.542784.063215.856387.71662



CDS Structure of MLOC_47583






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK366718
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366718CUST_21337_PI427708080NoneNoneNone
MLOC_2821.1NoneAvailableNonecontig_125065 (Mapped)
MLOC_31898.1NoneAvailableNonecontig_2233335 (Mapped)
MLOC_41727.1NoneAvailableNonecontig_2603094 (Not mapped)
MLOC_47583.1NoneAvailableAvailablecontig_308509 (Mapped)
MLOC_47584.1NoneAvailableNonecontig_308509 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----