- Predicted Gene MLOC_47562
MLOC_47562 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.0232336 | 2.93702 | 1.76143 | 0.62748 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.52371 | 3.54819 | 6.27004 | 1.58356 |
| INF1 | Young developing inflorescences (5mm) | 0.264455 | 3.62442 | 2.02673 | 0.625137 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.35113 | 2.25734 | 2.01174 | 1.46585 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.552683 | 1.28196 | 1.67322 | 0.500513 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.41967 | 1.34973 | 1.95944 | 2.69391 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.12954 | 1.88021 | 0.212394 | 0.595389 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.911426 | 1.4103 | 2.84295 | 1.6322 |
CDS Structure of MLOC_47562
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_47562.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g42750.1 |
+1 |
7e-14 |
58 |
26/30 (87%) |
13103.m04594 protein roothairless 1, putative, expressed |
| TAIR PP10 |
AT1G47550.2 |
+1 |
4e-12 |
53 |
22/30 (73%) |
| Symbols: SEC3A | exocyst complex component sec3A | chr1:17457171-17463896 FORWARD LENGTH=888 |