MLOC_47534 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.134337.519630.24060
LEAShoots from the seedlings (10 cm shoot stage)39.57231.801121.6510
INF1Young developing inflorescences (5mm)47.964540.451338.86240
INF2Developing inflorescences (1-1.5 cm)64.580465.611657.35930
ROORoots from the seedlings (10 cm shoot stage)9.7848327.24714.76150
NODDeveloping tillers at six leaf stage, 3rd internode16.923712.972110.88110
CAR5Developing grain, bracts removed (5 DPA)61.598550.670653.97950
CAR15Developing grain, bracts removed (15 DPA)21.647719.737421.67890



CDS Structure of MLOC_47534






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK362832
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362832CUST_20613_PI427708080NoneNoneNone
MLOC_19189.1NoneAvailableNonecontig_1583848 (Not mapped)
MLOC_27626.1NoneAvailableNonecontig_184867 (Mapped)
MLOC_42220.1NoneAvailableNonecontig_2631864 (Not mapped)
MLOC_45612.1NoneAvailableNonecontig_27942 (Not mapped)
MLOC_45769.1NoneAvailableNonecontig_281012 (Mapped)
MLOC_47534.1NoneAvailableNonecontig_307661 (Mapped)
MLOC_48461.1NoneAvailableNonecontig_324121 (Not mapped)
MLOC_54215.1NoneAvailableNonecontig_389711 (Not mapped)
MLOC_60837.1NoneAvailableNonecontig_44829 (Mapped)
MLOC_6456.1NoneAvailableNonecontig_137580 (Mapped)
MLOC_79380.1NoneAvailableAvailablecontig_8475 (Mapped)
MLOC_8701.1NoneAvailableNonecontig_145505 (Mapped)
MLOC_873.1NoneAvailableNonecontig_1071084 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----