MLOC_47533 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3327040.2936750.7610490.478376
LEAShoots from the seedlings (10 cm shoot stage)00.5491600.34511
INF1Young developing inflorescences (5mm)1.403680.7105770.2691190.706806
INF2Developing inflorescences (1-1.5 cm)0.7804651.015991.680961.24275
ROORoots from the seedlings (10 cm shoot stage)000.7449740.267797
NODDeveloping tillers at six leaf stage, 3rd internode00.3963620.395621.23184
CAR5Developing grain, bracts removed (5 DPA)1.287330.970641.29771.11548
CAR15Developing grain, bracts removed (15 DPA)1.134940.5186850.3238321.83416



CDS Structure of MLOC_47533






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_47533.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_47533.1CUST_6703_PI427708083AvailableAvailablecontig_307649 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g52960.1 +3 3e-11 61 27/35 (77%) 13102.m06040 protein PHD-finger domain containing protein, putative, expressed
TAIR PP10None-----