- Predicted Gene MLOC_47532
MLOC_47532 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0.0275916 | 0.0242723 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 89.3471 | 91.3182 | 76.2845 | 88.1444 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.38509 | 1.21263 | 2.78206 | 4.3332 |
CDS Structure of MLOC_47532
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_47532.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g08330.1 |
-1 |
4e-144 |
427 |
264/452 (58%) |
13101.m00870 protein aspartic proteinase nepenthesin-1 precursor, putative |
| TAIR PP10 |
AT1G64830.1 |
-1 |
6e-59 |
204 |
151/430 (35%) |
Eukaryotic aspartyl protease family protein | chr1:24091271-24092566 REVERSE LENGTH=431 |