MLOC_47528 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.113720.3241391.011420
LEAShoots from the seedlings (10 cm shoot stage)1.2180700.4856210
INF1Young developing inflorescences (5mm)0.6875182.030242.50310
INF2Developing inflorescences (1-1.5 cm)1.842941.216072.176670
ROORoots from the seedlings (10 cm shoot stage)00.35658600
NODDeveloping tillers at six leaf stage, 3rd internode0.9109091.292721.61010
CAR5Developing grain, bracts removed (5 DPA)0.3351850.6022181.503280
CAR15Developing grain, bracts removed (15 DPA)00.3780760.5458890



CDS Structure of MLOC_47528






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK249789.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249789.1CUST_13946_PI427708083NoneNoneNone
MLOC_28950.1NoneAvailableNonecontig_1961744 (Not mapped)
MLOC_29180.1NoneAvailableNonecontig_198306 (Not mapped)
MLOC_30048.1NoneAvailableAvailablecontig_205984 (Mapped)
MLOC_32714.1NoneAvailableNonecontig_23140 (Not mapped)
MLOC_46139.1NoneAvailableNonecontig_286014 (Mapped)
MLOC_47528.1NoneAvailableNonecontig_307560 (Mapped)
MLOC_80321.1NoneAvailableNonecontig_897855 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----