MLOC_47517 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains80.346.957855.8559.0365
LEAShoots from the seedlings (10 cm shoot stage)23.15213.9612.29514.4145
INF1Young developing inflorescences (5mm)28.632332.749337.698727.526
INF2Developing inflorescences (1-1.5 cm)20.899920.088918.875622.6852
ROORoots from the seedlings (10 cm shoot stage)71.962142.28432.53157.5901
NODDeveloping tillers at six leaf stage, 3rd internode36.612450.018955.5209176.581
CAR5Developing grain, bracts removed (5 DPA)34.49638.148241.584338.009
CAR15Developing grain, bracts removed (15 DPA)22.59825.848721.891155.0603



CDS Structure of MLOC_47517






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK367138
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367138CUST_14243_PI427708083NoneNoneNone
MLOC_26707.1NoneAvailableNonecontig_1774243 (Not mapped)
MLOC_47416.1NoneAvailableNonecontig_30576 (Mapped)
MLOC_47517.1NoneAvailableAvailablecontig_307335 (Mapped)
MLOC_52646.1NoneAvailableNonecontig_376770 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----