MLOC_47509 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains27.814855.927459.00770
LEAShoots from the seedlings (10 cm shoot stage)64.536753.044642.66490
INF1Young developing inflorescences (5mm)73.0505107.682124.5490
INF2Developing inflorescences (1-1.5 cm)139.204125.76129.5680
ROORoots from the seedlings (10 cm shoot stage)34.763961.216473.63170
NODDeveloping tillers at six leaf stage, 3rd internode86.999656.999558.69410
CAR5Developing grain, bracts removed (5 DPA)77.902274.850373.40950
CAR15Developing grain, bracts removed (15 DPA)26.270122.160528.74760



CDS Structure of MLOC_47509






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK250044.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250044.1NoneNoneNoneNone
MLOC_30055.1NoneAvailableNonecontig_206039 (Mapped)
MLOC_33699.1NoneAvailableAvailablecontig_239604 (Mapped)
MLOC_47509.1NoneAvailableNonecontig_307176 (Not mapped)
MLOC_50742.1NoneAvailableNonecontig_365685 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----