- Predicted Gene MLOC_47469
MLOC_47469 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.3419 | 54.6218 | 43.0529 | 38.9378 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 47.1479 | 38.9724 | 37.7284 | 34.8365 |
| INF1 | Young developing inflorescences (5mm) | 69.5058 | 68.6599 | 64.9106 | 55.4411 |
| INF2 | Developing inflorescences (1-1.5 cm) | 95.267 | 87.3384 | 74.0169 | 93.505 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 20.8522 | 36.7527 | 26.4499 | 38.7241 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 17.458 | 28.3639 | 16.1678 | 84.9792 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 65.326 | 55.2169 | 57.2179 | 55.8855 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 45.3892 | 42.2987 | 42.1347 | 97.8554 |
CDS Structure of MLOC_47469
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_47469.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g05500.2 |
-1 |
0.0 |
1870 |
1066/1473 (72%) |
13101.m00525 protein zinc finger protein, putative, expressed |
| TAIR PP10 |
AT5G02310.1 |
-1 |
0.0 |
947 |
626/1483 (42%) |
| Symbols: PRT6 | proteolysis 6 | chr5:474279-482552 FORWARD LENGTH=2006 |