- Predicted Gene MLOC_47445
MLOC_47445 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_47445_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_47445_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 7.26894 | 8.01638 | 7.98481 | 7.27365 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 12.821 | 10.2451 | 11.9225 | 9.39451 |
INF1 | Young developing inflorescences (5mm) | 10.4245 | 11.9775 | 18.3809 | 10.3081 |
INF2 | Developing inflorescences (1-1.5 cm) | 19.4027 | 26.2159 | 25.6413 | 24.4286 |
ROO | Roots from the seedlings (10 cm shoot stage) | 8.37868 | 7.51067 | 9.12492 | 8.88452 |
NOD | Developing tillers at six leaf stage, 3rd internode | 13.7938 | 16.3296 | 31.0296 | 60.3085 |
CAR5 | Developing grain, bracts removed (5 DPA) | 13.4811 | 15.6574 | 13.3797 | 12.9065 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.08178 | 6.96762 | 5.37648 | 13.9756 |
CDS Structure of MLOC_47445
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_47445.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g45180.1 |
-3 |
8e-74 |
241 |
113/153 (74%) |
13103.m04867 protein expressed protein |
TAIR PP10 |
AT1G28760.1 |
-3 |
1e-26 |
110 |
51/137 (37%) |
Uncharacterized conserved protein (DUF2215) | chr1:10103158-10104588 FORWARD LENGTH=476 |