MLOC_47438 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.686556.546256.479926.03221
LEAShoots from the seedlings (10 cm shoot stage)7.171584.801744.492174.81574
INF1Young developing inflorescences (5mm)12.40210.742214.734511.7584
INF2Developing inflorescences (1-1.5 cm)24.432718.109521.955123.8193
ROORoots from the seedlings (10 cm shoot stage)6.084087.431817.698989.12971
NODDeveloping tillers at six leaf stage, 3rd internode8.121593.757475.3706514.9346
CAR5Developing grain, bracts removed (5 DPA)10.12897.826969.411598.8168
CAR15Developing grain, bracts removed (15 DPA)5.22494.510675.4257512.6749



CDS Structure of MLOC_47438






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK252526.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252526.1NoneNoneNoneNone
MLOC_27125.1NoneAvailableNonecontig_1807998 (Not mapped)
MLOC_33500.1NoneAvailableNonecontig_2379171 (Not mapped)
MLOC_47438.1NoneAvailableAvailablecontig_306081 (Mapped)
MLOC_47582.1NoneAvailableNonecontig_308503 (Mapped)
MLOC_55578.1NoneAvailableNonecontig_400796 (Mapped)
MLOC_63216.1NoneAvailableNonecontig_474007 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----