MLOC_47434 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)000.4673820
INF1Young developing inflorescences (5mm)00.9335190.3972270
INF2Developing inflorescences (1-1.5 cm)0.455392000
ROORoots from the seedlings (10 cm shoot stage)0.58801000
NODDeveloping tillers at six leaf stage, 3rd internode00.1432020.1570510
CAR5Developing grain, bracts removed (5 DPA)0.29965100.3357610
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_47434






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK249301.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249301.1CUST_23254_PI427708080NoneNoneNone
MLOC_13145.1NoneAvailableNonecontig_156493 (Mapped)
MLOC_1912.1NoneAvailableNonecontig_1170319 (Not mapped)
MLOC_2544.1NoneAvailableNonecontig_1226734 (Not mapped)
MLOC_2887.1NoneAvailableNonecontig_1257715 (Not mapped)
MLOC_29047.1NoneAvailableNonecontig_1969596 (Not mapped)
MLOC_30776.1NoneAvailableNonecontig_21252 (Not mapped)
MLOC_33489.1NoneAvailableNonecontig_237800 (Not mapped)
MLOC_35846.1NoneAvailableNonecontig_252373 (Mapped)
MLOC_41311.1NoneAvailableNonecontig_2582226 (Not mapped)
MLOC_42452.1NoneAvailableNonecontig_2645397 (Not mapped)
MLOC_46466.1NoneAvailableNonecontig_290832 (Mapped)
MLOC_47434.1NoneAvailableNonecontig_306050 (Mapped)
MLOC_48547.1NoneAvailableAvailablecontig_325745 (Not mapped)
MLOC_59622.1NoneAvailableNonecontig_437690 (Mapped)
MLOC_80103.1NoneAvailableNonecontig_886570 (Not mapped)
MLOC_955.1NoneAvailableNonecontig_1079535 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----