MLOC_47416 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains60.017828.071730.94610
LEAShoots from the seedlings (10 cm shoot stage)11.84829.49037.370540
INF1Young developing inflorescences (5mm)16.847921.40918.42720
INF2Developing inflorescences (1-1.5 cm)9.017099.9212210.69310
ROORoots from the seedlings (10 cm shoot stage)51.237321.405323.27480
NODDeveloping tillers at six leaf stage, 3rd internode20.612334.0245.96340
CAR5Developing grain, bracts removed (5 DPA)14.04116.867619.62040
CAR15Developing grain, bracts removed (15 DPA)7.631789.176717.099840



CDS Structure of MLOC_47416






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK367138
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367138CUST_14243_PI427708083NoneNoneNone
MLOC_26707.1NoneAvailableNonecontig_1774243 (Not mapped)
MLOC_47416.1NoneAvailableNonecontig_30576 (Mapped)
MLOC_47517.1NoneAvailableAvailablecontig_307335 (Mapped)
MLOC_52646.1NoneAvailableNonecontig_376770 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----