- Predicted Gene MLOC_47380
MLOC_47380 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.46416 | 4.03223 | 4.75181 | 5.37907 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.69317 | 4.86192 | 4.35942 | 5.03289 |
| INF1 | Young developing inflorescences (5mm) | 17.7473 | 23.7891 | 25.4925 | 27.9196 |
| INF2 | Developing inflorescences (1-1.5 cm) | 20.6122 | 24.5093 | 21.5205 | 34.1605 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.17033 | 4.84552 | 5.02292 | 8.30148 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.45332 | 2.98443 | 2.63254 | 10.8362 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 14.074 | 14.0109 | 12.8032 | 18.3163 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.66741 | 3.73239 | 4.15321 | 12.5495 |
CDS Structure of MLOC_47380
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_47380.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g04310.2 |
+3 |
3e-43 |
154 |
112/185 (61%) |
13103.m00439 protein BHLH transcription factor, putative, expressed |
| TAIR PP10 |
AT5G65640.1 |
+3 |
2e-46 |
161 |
105/186 (56%) |
| Symbols: bHLH093 | beta HLH protein 93 | chr5:26237137-26238904 FORWARD LENGTH=351 |