- Predicted Gene MLOC_47380
MLOC_47380 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_47380_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_47380_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.46416 | 4.03223 | 4.75181 | 5.37907 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 6.69317 | 4.86192 | 4.35942 | 5.03289 |
INF1 | Young developing inflorescences (5mm) | 17.7473 | 23.7891 | 25.4925 | 27.9196 |
INF2 | Developing inflorescences (1-1.5 cm) | 20.6122 | 24.5093 | 21.5205 | 34.1605 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.17033 | 4.84552 | 5.02292 | 8.30148 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.45332 | 2.98443 | 2.63254 | 10.8362 |
CAR5 | Developing grain, bracts removed (5 DPA) | 14.074 | 14.0109 | 12.8032 | 18.3163 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.66741 | 3.73239 | 4.15321 | 12.5495 |
CDS Structure of MLOC_47380
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_47380.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g04310.2 |
+3 |
3e-43 |
154 |
112/185 (61%) |
13103.m00439 protein BHLH transcription factor, putative, expressed |
TAIR PP10 |
AT5G65640.1 |
+3 |
2e-46 |
161 |
105/186 (56%) |
| Symbols: bHLH093 | beta HLH protein 93 | chr5:26237137-26238904 FORWARD LENGTH=351 |