MLOC_4738 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.98781 | 5.19672 | 5.80914 | 5.09471 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 26.3603 | 7.56437 | 15.4958 | 14.7268 |
| INF1 | Young developing inflorescences (5mm) | 4.03479 | 4.49894 | 3.40195 | 3.35319 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.51128 | 6.15403 | 4.99046 | 5.38215 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.4306 | 8.96825 | 9.21374 | 10.4739 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0691618 | 0.113563 | 0.0376352 | 0.329182 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 17.1944 | 17.0885 | 16.8817 | 16.4161 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.62796 | 1.94557 | 2.09469 | 5.1345 |
CDS Structure of MLOC_4738
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4738.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g44970.1 |
+3 |
0.0 |
820 |
440/528 (83%) |
13101.m04608 protein polygalacturonase, putative, expressed |
| TAIR PP10 |
AT1G60590.1 |
+3 |
0.0 |
558 |
299/530 (56%) |
Pectin lyase-like superfamily protein | chr1:22314426-22316867 REVERSE LENGTH=540 |
