- Predicted Gene MLOC_47346
MLOC_47346 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 4.84667 | 3.71773 | 4.09584 | 3.81077 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 6.68377 | 9.22753 | 11.7037 | 6.61812 |
INF1 | Young developing inflorescences (5mm) | 1.31151 | 1.35416 | 1.04673 | 1.05241 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.69884 | 0.671104 | 0.673706 | 0.752381 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.87824 | 0.988446 | 0.932464 | 1.06666 |
NOD | Developing tillers at six leaf stage, 3rd internode | 6.45589 | 4.7233 | 10.8027 | 14.1439 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.36507 | 3.68241 | 3.46529 | 3.37174 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.874134 | 1.01375 | 0.768455 | 2.23488 |
CDS Structure of MLOC_47346
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_47346.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g62180.3 |
+3 |
0.0 |
548 |
286/379 (75%) |
13103.m06864 protein lectin protein kinase family protein, putative, expressed |
TAIR PP10 |
AT1G34300.1 |
+3 |
2e-105 |
343 |
188/374 (50%) |
lectin protein kinase family protein | chr1:12503450-12505939 FORWARD LENGTH=829 |