MLOC_47346 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.846673.717734.095843.81077
LEAShoots from the seedlings (10 cm shoot stage)6.683779.2275311.70376.61812
INF1Young developing inflorescences (5mm)1.311511.354161.046731.05241
INF2Developing inflorescences (1-1.5 cm)0.698840.6711040.6737060.752381
ROORoots from the seedlings (10 cm shoot stage)1.878240.9884460.9324641.06666
NODDeveloping tillers at six leaf stage, 3rd internode6.455894.723310.802714.1439
CAR5Developing grain, bracts removed (5 DPA)3.365073.682413.465293.37174
CAR15Developing grain, bracts removed (15 DPA)0.8741341.013750.7684552.23488



CDS Structure of MLOC_47346






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_47346.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354098NoneNoneNoneNone
MLOC_47346.1CUST_242_PI427708083AvailableAvailablecontig_304519 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g62180.3 +3 0.0 548 286/379 (75%) 13103.m06864 protein lectin protein kinase family protein, putative, expressed
TAIR PP10 AT1G34300.1 +3 2e-105 343 188/374 (50%) lectin protein kinase family protein | chr1:12503450-12505939 FORWARD LENGTH=829