MLOC_47343 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.499684.564442.992030
LEAShoots from the seedlings (10 cm shoot stage)5.821898.4666721.13250
INF1Young developing inflorescences (5mm)5.669583.795839.266230
INF2Developing inflorescences (1-1.5 cm)15.687813.93029.98690
ROORoots from the seedlings (10 cm shoot stage)04.2824800
NODDeveloping tillers at six leaf stage, 3rd internode3.340713.49411.82660
CAR5Developing grain, bracts removed (5 DPA)6.8901512.31256.525740
CAR15Developing grain, bracts removed (15 DPA)6.6320310.55776.031560



CDS Structure of MLOC_47343






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK355680
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355680CUST_19549_PI427708080NoneNoneNone
MLOC_1432.1NoneAvailableNonecontig_1124581 (Mapped)
MLOC_1721.1NoneAvailableNonecontig_115379 (Mapped)
MLOC_19654.2NoneAvailableAvailablecontig_158583 (Mapped)
MLOC_26414.1NoneAvailableNonecontig_1754257 (Not mapped)
MLOC_28399.1NoneAvailableNonecontig_1914539 (Mapped)
MLOC_28766.3NoneAvailableNonecontig_194588 (Mapped)
MLOC_30083.1NoneAvailableNonecontig_206337 (Not mapped)
MLOC_30447.1NoneAvailableNonecontig_2097934 (Not mapped)
MLOC_32423.1NoneAvailableNonecontig_2285024 (Not mapped)
MLOC_32474.1NoneAvailableNonecontig_2288934 (Not mapped)
MLOC_34292.1NoneAvailableNonecontig_2433807 (Not mapped)
MLOC_40540.1NoneAvailableNonecontig_2560861 (Mapped)
MLOC_41509.1NoneAvailableNonecontig_259207 (Mapped)
MLOC_43661.1NoneAvailableNonecontig_271927 (Mapped)
MLOC_45977.1NoneAvailableNonecontig_283829 (Not mapped)
MLOC_47343.1NoneAvailableNonecontig_304483 (Mapped)
MLOC_48137.1NoneAvailableNonecontig_318199 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----