MLOC_47339 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains27.282327.292733.08690
LEAShoots from the seedlings (10 cm shoot stage)51.321175.455352.98860
INF1Young developing inflorescences (5mm)8.2992117.710112.8350
INF2Developing inflorescences (1-1.5 cm)6.544768.4878310.66950
ROORoots from the seedlings (10 cm shoot stage)36.780117.685529.68750
NODDeveloping tillers at six leaf stage, 3rd internode36.208937.300825.74230
CAR5Developing grain, bracts removed (5 DPA)4.519443.823023.392610
CAR15Developing grain, bracts removed (15 DPA)1.434540.3037751.699960



CDS Structure of MLOC_47339






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248906.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248906.1CUST_18623_PI427708080NoneNoneNone
MLOC_31971.4NoneAvailableNonecontig_223946 (Mapped)
MLOC_32109.3NoneAvailableNonecontig_225323 (Mapped)
MLOC_47339.1NoneAvailableNonecontig_304414 (Mapped)
MLOC_48158.1NoneAvailableNonecontig_318621 (Mapped)
MLOC_49352.1NoneAvailableNonecontig_340230 (Mapped)
MLOC_56781.1NoneAvailableNonecontig_411449 (Not mapped)
MLOC_74541.1NoneAvailableAvailablecontig_66062 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----