MLOC_4729 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.616914 | 3.28188 | 2.68398 | 1.91713 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.23707 | 7.41221 | 7.02064 | 5.38349 |
| INF1 | Young developing inflorescences (5mm) | 5.16915 | 4.98367 | 4.27147 | 3.34039 |
| INF2 | Developing inflorescences (1-1.5 cm) | 5.19714 | 5.76542 | 5.28802 | 5.00673 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.0275 | 4.70357 | 3.63334 | 4.13974 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.70665 | 2.88246 | 4.70395 | 9.39919 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.92242 | 3.05192 | 3.69829 | 2.50819 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.56023 | 1.71387 | 1.64064 | 2.9308 |
CDS Structure of MLOC_4729
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4729.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g15700.1 |
-3 |
0.0 |
1829 |
996/1564 (64%) |
13106.m01735 protein expressed protein |
| TAIR PP10 |
AT3G19190.1 |
-3 |
5e-177 |
582 |
472/1592 (30%) |
| Symbols: ATATG2, ATG2 | autophagy 2 | chr3:6639879-6648274 FORWARD LENGTH=1839 |
