- Predicted Gene MLOC_47233
MLOC_47233 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_47233_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_47233_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 6.66056 | 8.20458 | 8.89855 | 9.83649 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.97361 | 0 | 2.25158 | 3.03036 |
INF1 | Young developing inflorescences (5mm) | 7.98455 | 5.79146 | 4.5722 | 6.74681 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.48965 | 5.56536 | 10.5032 | 8.90396 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.6172 | 3.0121 | 6.14909 | 5.58173 |
NOD | Developing tillers at six leaf stage, 3rd internode | 8.54933 | 7.73697 | 10.635 | 30.7285 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.92273 | 2.2185 | 5.04602 | 4.31806 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.637153 | 0.359202 | 0.478002 | 1.43701 |
CDS Structure of MLOC_47233
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_47233.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 | None | - | - | - | - | - |
TAIR PP10 |
AT3G20660.1 |
+2 |
5e-15 |
69 |
31/51 (61%) |
| Symbols: AtOCT4, 4-Oct | organic cation/carnitine transporter4 | chr3:7225271-7228510 REVERSE LENGTH=526 |