MLOC_47227 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.844831.0471800
LEAShoots from the seedlings (10 cm shoot stage)002.571230
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)00.39321400
ROORoots from the seedlings (10 cm shoot stage)2.983380.56199100
NODDeveloping tillers at six leaf stage, 3rd internode00.1411920.2802740
CAR5Developing grain, bracts removed (5 DPA)00.4887860.5936280
CAR15Developing grain, bracts removed (15 DPA)00.61811200



CDS Structure of MLOC_47227






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK375720
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375720CUST_22886_PI427708080NoneNoneNone
MLOC_15684.1NoneAvailableAvailablecontig_1571319 (Mapped)
MLOC_21236.1NoneAvailableNonecontig_1593759 (Mapped)
MLOC_27998.1NoneAvailableNonecontig_188166 (Mapped)
MLOC_47227.1NoneAvailableNonecontig_302762 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----