- Predicted Gene MLOC_47200
MLOC_47200 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.11846 | 1.99162 | 3.23398 | 2.13525 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.10942 | 5.22857 | 8.02913 | 4.96235 |
| INF1 | Young developing inflorescences (5mm) | 1.07897 | 1.91014 | 1.46468 | 1.11432 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.98052 | 0.729995 | 0.80294 | 0.853831 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 9.26959 | 12.0697 | 11.123 | 12.5251 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 7.74148 | 8.20087 | 19.5468 | 29.6627 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.3449 | 2.88754 | 2.5853 | 1.93463 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.44376 | 3.0744 | 3.47034 | 5.67428 |
CDS Structure of MLOC_47200
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_47200.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g47870.2 |
-2 |
2e-80 |
261 |
129/151 (85%) |
13104.m04863 protein PINHEAD, putative, expressed |
| TAIR PP10 |
AT1G48410.1 |
-2 |
1e-77 |
252 |
122/151 (81%) |
| Symbols: AGO1 | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | chr1:17886285-17891892 REVERSE LENGTH=1048 |