MLOC_47186 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.554710.52637301.06668
LEAShoots from the seedlings (10 cm shoot stage)1.5048900.7918280.912155
INF1Young developing inflorescences (5mm)1.894422.969643.423531.5473
INF2Developing inflorescences (1-1.5 cm)5.482095.665124.243934.41615
ROORoots from the seedlings (10 cm shoot stage)00.52690701.01501
NODDeveloping tillers at six leaf stage, 3rd internode0.250941.202310.9757592.6688
CAR5Developing grain, bracts removed (5 DPA)2.54351.344881.149141.37258
CAR15Developing grain, bracts removed (15 DPA)0.845270.5752680.8512611.48732



CDS Structure of MLOC_47186






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_47186.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_47186.1CUST_12565_PI427708083AvailableAvailablecontig_301988 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g55960.1 +1 6e-22 93 42/49 (86%) 13104.m05813 protein NADPH reductase, putative, expressed
TAIR PP10 AT4G24520.2 +1 8e-18 81 35/49 (71%) | Symbols: ATR1 | P450 reductase 1 | chr4:12663065-12667066 REVERSE LENGTH=688