MLOC_47183 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.104550.9231131.521770
LEAShoots from the seedlings (10 cm shoot stage)1.972521.64912.553430
INF1Young developing inflorescences (5mm)1.554251.757660.811270
INF2Developing inflorescences (1-1.5 cm)1.568351.144890.6263470
ROORoots from the seedlings (10 cm shoot stage)1.44010.6122431.44230
NODDeveloping tillers at six leaf stage, 3rd internode1.254652.131292.365290
CAR5Developing grain, bracts removed (5 DPA)0.8408270.5735790.4696180
CAR15Developing grain, bracts removed (15 DPA)0.07420110.1539960.3287930



CDS Structure of MLOC_47183






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK249068.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249068.1NoneNoneNoneNone
MLOC_27052.1NoneAvailableNonecontig_1801349 (Not mapped)
MLOC_29751.1NoneAvailableNonecontig_2033577 (Mapped)
MLOC_41051.1NoneAvailableNonecontig_2570131 (Not mapped)
MLOC_47183.1NoneAvailableNonecontig_301985 (Not mapped)
MLOC_7446.1NoneAvailableAvailablecontig_139275 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----