- Predicted Gene MLOC_47169
MLOC_47169 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_47169_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_47169_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.541514 | 1.91408 | 1.79978 | 1.27868 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.864346 | 0.444873 | 1.84935 | 0.83188 |
INF1 | Young developing inflorescences (5mm) | 2.34378 | 1.88511 | 2.93856 | 1.76608 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.59039 | 2.90287 | 0.98456 | 2.52424 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.31857 | 2.53468 | 0.803723 | 2.30198 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.419866 | 0.607972 | 0.927616 | 2.08023 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.39991 | 1.66782 | 0.765088 | 1.16545 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.746557 | 0.522792 | 0 | 1.82917 |
CDS Structure of MLOC_47169
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_47169.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g03760.2 |
+2 |
4e-39 |
139 |
68/102 (67%) |
13101.m00328 protein expressed protein |
TAIR PP10 |
AT1G70770.2 |
+2 |
2e-29 |
112 |
55/101 (54%) |
Protein of unknown function DUF2359, transmembrane | chr1:26688622-26691185 REVERSE LENGTH=610 |