MLOC_47149 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.064519.085817.982816.7413
LEAShoots from the seedlings (10 cm shoot stage)14.278313.079111.420910.7798
INF1Young developing inflorescences (5mm)37.820439.673243.047634.859
INF2Developing inflorescences (1-1.5 cm)64.94661.733262.019668.4178
ROORoots from the seedlings (10 cm shoot stage)7.6613612.252414.991314.0583
NODDeveloping tillers at six leaf stage, 3rd internode9.308169.1103214.834730.8434
CAR5Developing grain, bracts removed (5 DPA)30.775133.539128.050229.8741
CAR15Developing grain, bracts removed (15 DPA)11.01679.7662711.873625.7816



CDS Structure of MLOC_47149






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK356981
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356981NoneNoneNoneNone
MLOC_31889.1NoneAvailableNonecontig_2232617 (Not mapped)
MLOC_46081.1NoneAvailableNonecontig_285260 (Not mapped)
MLOC_47149.1NoneAvailableAvailablecontig_301511 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----