- Predicted Gene MLOC_47119
MLOC_47119 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_47119_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_47119_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 1.47498 | 2.18461 | 1.83014 | 1.74782 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 6.62015 | 6.78491 | 7.60927 | 5.50742 |
INF1 | Young developing inflorescences (5mm) | 5.27683 | 5.72906 | 6.23739 | 4.35255 |
INF2 | Developing inflorescences (1-1.5 cm) | 6.02214 | 7.15418 | 6.04713 | 6.48998 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.13751 | 1.27656 | 1.71136 | 1.41775 |
NOD | Developing tillers at six leaf stage, 3rd internode | 4.71107 | 6.6845 | 8.61503 | 20.211 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.73598 | 5.31704 | 6.07036 | 4.79557 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.63527 | 4.80215 | 4.57038 | 9.65625 |
CDS Structure of MLOC_47119
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_47119.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g20470.1 |
-1 |
5e-97 |
301 |
146/178 (82%) |
13110.m01676 protein MATE efflux family protein, putative, expressed |
TAIR PP10 |
AT5G52450.1 |
-1 |
3e-67 |
223 |
102/176 (58%) |
MATE efflux family protein | chr5:21289042-21291749 REVERSE LENGTH=486 |