MLOC_47087 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.469520.4118040.5826040
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)00.45441400
NODDeveloping tillers at six leaf stage, 3rd internode0.6050532.292390.7698070
CAR5Developing grain, bracts removed (5 DPA)0.42849900.8642720
CAR15Developing grain, bracts removed (15 DPA)001.559980



CDS Structure of MLOC_47087






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK376617
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376617CUST_23065_PI427708080NoneNoneNone
MLOC_28753.1NoneAvailableNonecontig_1944950 (Mapped)
MLOC_29023.1NoneAvailableNonecontig_1967300 (Not mapped)
MLOC_30322.1NoneAvailableNonecontig_208381 (Mapped)
MLOC_32003.1NoneAvailableAvailablecontig_224317 (Mapped)
MLOC_32837.2NoneAvailableNonecontig_232401 (Mapped)
MLOC_33118.1NoneAvailableNonecontig_2346109 (Mapped)
MLOC_40680.1NoneAvailableNonecontig_2562902 (Not mapped)
MLOC_41632.1NoneAvailableNonecontig_2598202 (Not mapped)
MLOC_47087.1NoneAvailableNonecontig_30045 (Not mapped)
MLOC_53109.1NoneAvailableNonecontig_380657 (Mapped)
MLOC_77616.1NoneAvailableNonecontig_764078 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----