- Predicted Gene MLOC_47072
MLOC_47072 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 45.6436 | 30.5134 | 36.9825 | 31.2622 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 12.0169 | 9.16837 | 12.9121 | 8.62959 |
| INF1 | Young developing inflorescences (5mm) | 4.28321 | 2.44855 | 2.95708 | 2.38252 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.687838 | 0.916456 | 2.09499 | 0.997449 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 33.5377 | 22.3144 | 23.2372 | 25.3163 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 59.6838 | 45.5697 | 36.4403 | 133.202 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.90665 | 2.23407 | 2.07436 | 1.98499 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.262622 | 0.267886 | 0.153833 | 0.495652 |
CDS Structure of MLOC_47072
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_47072.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g12150.1 |
-2 |
4e-135 |
396 |
201/233 (86%) |
13106.m01319 protein shikimate kinase, putative, expressed |
| TAIR PP10 |
AT2G21940.5 |
-2 |
9e-81 |
256 |
126/216 (58%) |
| Symbols: SK1, ATSK1 | shikimate kinase 1 | chr2:9351106-9352881 FORWARD LENGTH=303 |