- Predicted Gene MLOC_47055
MLOC_47055 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_47055_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_47055_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 7.82886 | 8.95409 | 8.15181 | 8.87966 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 8.53144 | 4.94364 | 4.82665 | 5.46889 |
INF1 | Young developing inflorescences (5mm) | 23.3341 | 22.2375 | 24.1319 | 19.6912 |
INF2 | Developing inflorescences (1-1.5 cm) | 27.9984 | 28.9728 | 27.926 | 31.7101 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.51748 | 8.85589 | 7.28517 | 10.3572 |
NOD | Developing tillers at six leaf stage, 3rd internode | 6.74518 | 6.42387 | 7.42995 | 23.0009 |
CAR5 | Developing grain, bracts removed (5 DPA) | 14.3906 | 15.1053 | 13.424 | 14.5332 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.69921 | 5.07217 | 5.60191 | 11.7886 |
CDS Structure of MLOC_47055
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_47055.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g51640.1 |
+1 |
1e-118 |
355 |
197/308 (64%) |
13102.m05876 protein expressed protein |
TAIR PP10 |
AT5G65120.1 |
+1 |
3e-14 |
74 |
67/225 (30%) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:26013274-26014504 FORWARD LENGTH=317 |