- Predicted Gene MLOC_46985
MLOC_46985 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 15.7838 | 13.9805 | 14.9457 | 8.66721 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 20.8571 | 17.1763 | 16.3692 | 9.33815 |
| INF1 | Young developing inflorescences (5mm) | 21.27 | 26.3274 | 29.2581 | 11.2057 |
| INF2 | Developing inflorescences (1-1.5 cm) | 25.0084 | 26.8908 | 23.913 | 16.9726 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 21.0978 | 15.8307 | 22.1153 | 11.5573 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 13.9331 | 12.5178 | 18.4618 | 26.9894 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 18.5672 | 16.2051 | 19.3252 | 9.58385 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.59781 | 5.50785 | 7.31511 | 6.58242 |
CDS Structure of MLOC_46985
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_46985.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g08960.2 |
+3 |
7e-34 |
126 |
59/60 (98%) |
13105.m00994 protein ubiquitin-conjugating enzyme, putative, expressed |
| TAIR PP10 |
AT2G02760.1 |
+3 |
8e-33 |
123 |
57/60 (95%) |
| Symbols: ATUBC2, UBC2 | ubiquiting-conjugating enzyme 2 | chr2:774271-775149 FORWARD LENGTH=152 |