- Predicted Gene MLOC_46940
MLOC_46940 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.72677 | 5.26749 | 4.16893 | 4.46431 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 8.08815 | 5.03051 | 4.9712 | 4.42009 |
| INF1 | Young developing inflorescences (5mm) | 13.4362 | 17.7657 | 20.2075 | 10.5451 |
| INF2 | Developing inflorescences (1-1.5 cm) | 16.4411 | 15.5373 | 18.3699 | 14.4795 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.55943 | 4.66205 | 3.66704 | 4.0593 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.08043 | 7.11747 | 16.2047 | 22.7058 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.07335 | 6.49621 | 6.49249 | 4.48554 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.14939 | 2.54768 | 1.98151 | 4.95364 |
CDS Structure of MLOC_46940
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_46940.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g72880.1 |
+3 |
2e-21 |
92 |
42/58 (72%) |
13101.m07948 protein DNA mismatch repair protein Mlh1, putative, expressed |
| TAIR PP10 |
AT4G09140.1 |
+3 |
4e-14 |
70 |
31/61 (51%) |
| Symbols: ATMLH1, MLH1 | MUTL-homologue 1 | chr4:5817107-5821035 REVERSE LENGTH=737 |