MLOC_46900 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.220532.985592.34472.69019
LEAShoots from the seedlings (10 cm shoot stage)2.432863.60583.275952.61
INF1Young developing inflorescences (5mm)3.637454.512164.584743.74694
INF2Developing inflorescences (1-1.5 cm)5.079625.510355.277886.03037
ROORoots from the seedlings (10 cm shoot stage)3.001162.904072.034213.4619
NODDeveloping tillers at six leaf stage, 3rd internode1.040021.867792.29156.08415
CAR5Developing grain, bracts removed (5 DPA)3.958964.310263.751324.08769
CAR15Developing grain, bracts removed (15 DPA)2.642872.144842.541225.9528



CDS Structure of MLOC_46900






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK373887
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373887CUST_25795_PI427708080NoneNoneNone
MLOC_1896.1NoneAvailableNonecontig_1169186 (Not mapped)
MLOC_26260.1NoneAvailableNonecontig_1744408 (Mapped)
MLOC_29508.1NoneAvailableNonecontig_2012068 (Mapped)
MLOC_31516.1NoneAvailableNonecontig_219765 (Mapped)
MLOC_41438.1NoneAvailableNonecontig_2588457 (Mapped)
MLOC_41954.1NoneAvailableNonecontig_2615475 (Not mapped)
MLOC_42260.1NoneAvailableNonecontig_263371 (Not mapped)
MLOC_46900.1NoneAvailableAvailablecontig_297417 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----