MLOC_46847 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.688214.504713.774982.97071
LEAShoots from the seedlings (10 cm shoot stage)2.268153.505625.522182.07646
INF1Young developing inflorescences (5mm)8.2858313.131612.34395.62568
INF2Developing inflorescences (1-1.5 cm)11.49778.150378.240917.48291
ROORoots from the seedlings (10 cm shoot stage)0.9250172.928592.499791.907
NODDeveloping tillers at six leaf stage, 3rd internode4.282339.93748.0161623.1497
CAR5Developing grain, bracts removed (5 DPA)4.973613.801444.896292.83666
CAR15Developing grain, bracts removed (15 DPA)1.318091.32141.959782.10527



CDS Structure of MLOC_46847






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK355158
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355158CUST_14008_PI427708083NoneNoneNone
MLOC_29466.1NoneAvailableNonecontig_200835 (Mapped)
MLOC_31899.1NoneAvailableNonecontig_2233361 (Not mapped)
MLOC_46847.1NoneAvailableAvailablecontig_296599 (Mapped)
MLOC_49107.1NoneAvailableNonecontig_335687 (Mapped)
MLOC_49530.1NoneAvailableNonecontig_343198 (Not mapped)
MLOC_50270.1NoneAvailableNonecontig_357847 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----