MLOC_4684 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.45684 | 3.22703 | 3.26916 | 3.46631 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.71302 | 2.31996 | 1.92849 | 1.6837 |
| INF1 | Young developing inflorescences (5mm) | 0.274434 | 0.195151 | 0.633108 | 0.310528 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0140763 | 0 | 0.18052 | 0.0810147 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.15282 | 5.64302 | 4.03853 | 6.78023 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 26.9047 | 20.8539 | 16.0981 | 59.349 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0 | 0 | 0 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.0729598 | 0.0325443 | 0.0425103 | 0.134867 |
CDS Structure of MLOC_4684
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4684.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g41680.1 |
-3 |
0.0 |
1243 |
649/713 (91%) |
13102.m04603 protein phenylalanine ammonia-lyase, putative, expressed |
| TAIR PP10 |
AT2G37040.1 |
-3 |
0.0 |
1013 |
528/722 (73%) |
| Symbols: PAL1, ATPAL1 | PHE ammonia lyase 1 | chr2:15557602-15560237 REVERSE LENGTH=725 |
