MLOC_46803 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1182120.10990800.429621
LEAShoots from the seedlings (10 cm shoot stage)00.6055600.499186
INF1Young developing inflorescences (5mm)0.4701690.5128820.2520190.62483
INF2Developing inflorescences (1-1.5 cm)0.5515220.0833310.1148220.670116
ROORoots from the seedlings (10 cm shoot stage)00.11571600.379202
NODDeveloping tillers at six leaf stage, 3rd internode0.08418690.03130630.07305780.77263
CAR5Developing grain, bracts removed (5 DPA)000.2198090.190713
CAR15Developing grain, bracts removed (15 DPA)0.0980741000.350075



CDS Structure of MLOC_46803






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_46803.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_46803.1CUST_6594_PI427708083AvailableAvailablecontig_295861 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g29620.1 -1 3e-63 142 63/75 (84%) 13107.m02977 protein OsSCP39 - Putative Serine Carboxypeptidase homologue, expressed
TAIR PP10 AT3G45010.1 -2 5e-57 119 53/66 (80%) | Symbols: scpl48 | serine carboxypeptidase-like 48 | chr3:16466328-16468845 FORWARD LENGTH=510