MLOC_46719 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.62387100.2659480
LEAShoots from the seedlings (10 cm shoot stage)0.6262350.325940.8543780
INF1Young developing inflorescences (5mm)0.493840.8668040.6353080
INF2Developing inflorescences (1-1.5 cm)1.48061.13381.443440
ROORoots from the seedlings (10 cm shoot stage)00.18945100
NODDeveloping tillers at six leaf stage, 3rd internode00.4102380.4172380
CAR5Developing grain, bracts removed (5 DPA)0.9909421.332350.7101090
CAR15Developing grain, bracts removed (15 DPA)0.5242880.3736370.5252620



CDS Structure of MLOC_46719






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK372571
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372571CUST_22333_PI427708080NoneNoneNone
MLOC_39867.2NoneAvailableNonecontig_255515 (Mapped)
MLOC_46719.1NoneAvailableNonecontig_294742 (Mapped)
MLOC_69504.1NoneAvailableAvailablecontig_56525 (Mapped)
MLOC_8861.1NoneAvailableNonecontig_146933 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----