MLOC_4671 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.85518 | 6.96133 | 6.77446 | 6.16646 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.99421 | 7.59806 | 6.18956 | 6.36751 |
| INF1 | Young developing inflorescences (5mm) | 13.9171 | 16.0934 | 15.6775 | 11.9355 |
| INF2 | Developing inflorescences (1-1.5 cm) | 25.8947 | 21.9316 | 20.6174 | 24.1794 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.48141 | 4.45391 | 3.53613 | 5.22423 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.39755 | 4.63662 | 4.48346 | 16.5064 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 9.21902 | 9.68841 | 10.1222 | 9.10809 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.79327 | 5.54187 | 5.49034 | 11.8975 |
CDS Structure of MLOC_4671
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4671.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g43790.1 |
-2 |
0.0 |
614 |
343/457 (75%) |
13106.m04589 protein transcription initiation factor TFIID subunit 1, putative, expressed |
| TAIR PP10 |
AT1G32750.1 |
-2 |
5e-53 |
202 |
186/547 (34%) |
| Symbols: HAF01, HAF1, HAC13, GTD1, TAF1 | HAC13 protein (HAC13) | chr1:11846385-11856261 REVERSE LENGTH=1919 |