MLOC_4670 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 20.402 | 31.4661 | 31.5712 | 32.0791 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 37.0474 | 28.3027 | 17.1649 | 26.2384 |
| INF1 | Young developing inflorescences (5mm) | 71.2767 | 77.8566 | 74.2992 | 66.2341 |
| INF2 | Developing inflorescences (1-1.5 cm) | 97.7168 | 90.5204 | 88.172 | 110.605 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 10.2153 | 23.301 | 20.6129 | 31.2755 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 23.825 | 24.0772 | 25.4572 | 101.324 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 46.0312 | 44.9263 | 47.063 | 50.2536 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 17.6846 | 15.2533 | 17.7349 | 40.5963 |
CDS Structure of MLOC_4670
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4670.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g44230.1 |
+3 |
0.0 |
863 |
444/612 (73%) |
13101.m04585 protein transcription factor X1, putative, expressed |
| TAIR PP10 |
AT3G48670.2 |
+3 |
8e-146 |
447 |
245/621 (39%) |
| Symbols: IDN2, RDM12 | XH/XS domain-containing protein | chr3:18031240-18033615 FORWARD LENGTH=647 |
