MLOC_46684 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.1474739.800431.908726.6145
LEAShoots from the seedlings (10 cm shoot stage)41.657118.197218.217421.9434
INF1Young developing inflorescences (5mm)50.728147.076140.776635.9575
INF2Developing inflorescences (1-1.5 cm)48.91354.29851.672851.6075
ROORoots from the seedlings (10 cm shoot stage)9.7829925.978817.784224.9592
NODDeveloping tillers at six leaf stage, 3rd internode21.56317.120710.039352.4695
CAR5Developing grain, bracts removed (5 DPA)37.138335.319439.439232.8952
CAR15Developing grain, bracts removed (15 DPA)9.695048.1968510.604418.6737



CDS Structure of MLOC_46684






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK368262
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368262CUST_25215_PI427708080NoneNoneNone
MLOC_31488.1NoneAvailableNonecontig_21942 (Not mapped)
MLOC_46684.3NoneAvailableAvailablecontig_294196 (Mapped)
MLOC_50197.1NoneAvailableNonecontig_356228 (Mapped)
MLOC_70915.2NoneAvailableNonecontig_58774 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----