MLOC_46679 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains26.328412.534526.11860
LEAShoots from the seedlings (10 cm shoot stage)11.899936.108715.91530
INF1Young developing inflorescences (5mm)7.7827117.902414.13440
INF2Developing inflorescences (1-1.5 cm)11.25165.9378611.26790
ROORoots from the seedlings (10 cm shoot stage)20.731819.48724.49190
NODDeveloping tillers at six leaf stage, 3rd internode20.451435.238225.29760
CAR5Developing grain, bracts removed (5 DPA)14.405210.466310.24780
CAR15Developing grain, bracts removed (15 DPA)10.2710.80556.985670



CDS Structure of MLOC_46679






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK357563
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357563CUST_19830_PI427708080NoneNoneNone
MLOC_26135.1NoneAvailableNonecontig_173789 (Mapped)
MLOC_30872.1NoneAvailableAvailablecontig_213513 (Mapped)
MLOC_46140.1NoneAvailableNonecontig_286037 (Not mapped)
MLOC_46679.1NoneAvailableNonecontig_29415 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----