- Predicted Gene MLOC_46656
MLOC_46656 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_46656_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_46656_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.60558 | 1.60448 | 2.20651 | 1.58887 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.31112 | 6.85726 | 3.45216 | 3.32452 |
INF1 | Young developing inflorescences (5mm) | 6.14957 | 7.63073 | 7.62302 | 4.71571 |
INF2 | Developing inflorescences (1-1.5 cm) | 13.7009 | 7.05012 | 10.5078 | 10.5217 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.76826 | 1.45106 | 2.46355 | 1.79559 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.3077 | 3.15402 | 4.27375 | 9.23016 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.01922 | 3.18884 | 3.02362 | 2.12121 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.28094 | 2.31145 | 4.4783 | 5.86471 |
CDS Structure of MLOC_46656
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_46656.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g46160.1 |
+1 |
7e-29 |
99 |
49/62 (79%) |
13107.m04859 protein MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed |
TAIR PP10 |
AT3G06190.1 |
+1 |
3e-19 |
71 |
35/83 (42%) |
| Symbols: ATBPM2, BPM2 | BTB-POZ and MATH domain 2 | chr3:1874577-1876575 REVERSE LENGTH=406 |