MLOC_46635 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1841460.6598450.2580590.343115
LEAShoots from the seedlings (10 cm shoot stage)1.204172.447560.2526080.852118
INF1Young developing inflorescences (5mm)0.6699020.5011350.6089890.376583
INF2Developing inflorescences (1-1.5 cm)1.726031.085392.115721.34114
ROORoots from the seedlings (10 cm shoot stage)00.7089840.5781690.739891
NODDeveloping tillers at six leaf stage, 3rd internode00.2601440.284080.67803
CAR5Developing grain, bracts removed (5 DPA)1.346060.9110750.7523820.780196
CAR15Developing grain, bracts removed (15 DPA)0.1776390.36377700.568778



CDS Structure of MLOC_46635






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK372981
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372981CUST_25700_PI427708080NoneNoneNone
MLOC_27017.2NoneAvailableNonecontig_179813 (Mapped)
MLOC_30834.2NoneAvailableNonecontig_2131226 (Not mapped)
MLOC_35437.1NoneAvailableNonecontig_248500 (Mapped)
MLOC_41464.1NoneAvailableNonecontig_2589432 (Mapped)
MLOC_46635.1NoneAvailableAvailablecontig_293496 (Not mapped)
MLOC_67335.1NoneAvailableNonecontig_52913 (Mapped)
MLOC_72408.1NoneAvailableNonecontig_615881 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----