MLOC_46612 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2143920.29451200.281463
LEAShoots from the seedlings (10 cm shoot stage)000.2224240.150946
INF1Young developing inflorescences (5mm)0.743510.4294610.5719090.488238
INF2Developing inflorescences (1-1.5 cm)0.7038540.651010.7981690.73703
ROORoots from the seedlings (10 cm shoot stage)0.1295980.2998280.4766240.305313
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.1196920.395190.3495730.265134
CAR15Developing grain, bracts removed (15 DPA)0.1340370.1034740.1926160.318368



CDS Structure of MLOC_46612






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_46612.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_46612.1CUST_12539_PI427708083AvailableAvailablecontig_293100 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g06290.1 +1 3e-18 86 39/46 (85%) 13106.m00645 protein GDSL-like lipase/acylhydrolase, putative, expressed
TAIR PP10None-----