- Predicted Gene MLOC_46590
MLOC_46590 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 54.745 | 67.1312 | 79.1647 | 52.3951 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 66.5607 | 53.4925 | 37.2926 | 38.4346 |
| INF1 | Young developing inflorescences (5mm) | 89.9189 | 95.6345 | 95.7504 | 61.2273 |
| INF2 | Developing inflorescences (1-1.5 cm) | 85.0638 | 88.912 | 64.5498 | 73.7075 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 35.0939 | 51.6497 | 41.0973 | 45.5934 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 49.0567 | 38.0721 | 30.0233 | 99.5305 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 59.6011 | 57.3245 | 67.3834 | 45.5338 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 35.832 | 31.7169 | 28.7647 | 60.4356 |
CDS Structure of MLOC_46590
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_46590.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g36930.1 |
+3 |
9e-19 |
83 |
50/63 (79%) |
13101.m03745 protein ubiquitin carboxyl-terminal hydrolase 6, putative, expressed |
| TAIR PP10 |
AT3G21280.1 |
+3 |
3e-17 |
78 |
45/59 (76%) |
| Symbols: UBP7 | ubiquitin-specific protease 7 | chr3:7478166-7482037 REVERSE LENGTH=532 |