MLOC_46580 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.1731228.992723.13670
LEAShoots from the seedlings (10 cm shoot stage)27.23089.426156.701960
INF1Young developing inflorescences (5mm)44.124937.431533.56930
INF2Developing inflorescences (1-1.5 cm)54.511162.17243.1180
ROORoots from the seedlings (10 cm shoot stage)7.8078518.081115.15710
NODDeveloping tillers at six leaf stage, 3rd internode19.855825.17915.20420
CAR5Developing grain, bracts removed (5 DPA)36.941333.315232.41170
CAR15Developing grain, bracts removed (15 DPA)15.445314.42713.57440



CDS Structure of MLOC_46580






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK361285
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361285CUST_20348_PI427708080NoneNoneNone
MLOC_13559.1NoneAvailableNonecontig_1565914 (Mapped)
MLOC_40430.2NoneAvailableNonecontig_2559528 (Not mapped)
MLOC_45319.1NoneAvailableAvailablecontig_277261 (Mapped)
MLOC_46580.1NoneAvailableNonecontig_292538 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----